QmitkUSNavigationMarkerPlacement.h

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/*============================================================================
 
The Medical Imaging Interaction Toolkit (MITK)
 
Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.
 
Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.
 
============================================================================*/
 
#ifndef QmitkUSNavigationMarkerPlacement_h
#define QmitkUSNavigationMarkerPlacement_h
 
#include <QmitkAbstractView.h>
 
#include "IO/mitkUSNavigationLoggingBackend.h"
#include "mitkNavigationDataRecorder.h"
#include "mitkNodeDisplacementFilter.h"
#include "mitkUSImageLoggingFilter.h"
#include <mitkMessage.h>
#include <mitkTextAnnotation2D.h>
#include <mitkAbstractUltrasoundTrackerDevice.h>
#include <mitkNavigationToolStorage.h>
#include <mitkNavigationDataObjectVisualizationFilter.h>
 
namespace itk
{
  template <class T>
  class SmartPointer;
}
 
namespace mitk
{
  class USNavigationStepTimer;
}
 
namespace Ui
{
  class QmitkUSNavigationMarkerPlacement;
}
 
class QmitkUSAbstractNavigationStep;
class QmitkUSNavigationStepPunctuationIntervention;
class QmitkStdMultiWidget;
class QTimer;
class QSignalMapper;
 
class QmitkUSNavigationMarkerPlacement : public QmitkAbstractView
{
  Q_OBJECT
 
    protected slots:
 
  void OnGetCursorPosition();
  void OnActualizeCtToUsRegistrationWidget();
  void OnInitializeCtToUsRegistration();
  void OnInitializeTargetMarking();
  void OnInitializeCriticalStructureMarking();
  void OnInitializeNavigation();
 
  void OnTimeout();
 
  void OnImageAndNavigationDataLoggingTimeout();
 
  void OnStartExperiment();
 
  void OnFinishExperiment();
 
  void OnSettingsChanged(itk::SmartPointer<mitk::DataNode>);
 
  void OnAddAblationZone(int size);
 
  void OnEnableNavigationLayout();
 
  void OnResetStandardLayout();
 
  void OnChangeLayoutClicked();
 
  void OnChangeAblationZone(int id, int newSize);
 
  void OnRenderWindowSelection();
 
  void OnRefreshView();
 
public:
  static const char *DATANAME_TUMOUR;
  static const char *DATANAME_TARGETSURFACE;
  static const char *DATANAME_ZONES;
  static const char *DATANAME_TARGETS;
  static const char *DATANAME_TARGETS_PATHS;
  static const char *DATANAME_REACHED_TARGETS;
 
  explicit QmitkUSNavigationMarkerPlacement();
  ~QmitkUSNavigationMarkerPlacement() override;
 
  void CreateQtPartControl(QWidget *parent) override;
 
  static const std::string VIEW_ID;
 
  void OnCombinedModalityPropertyChanged(const std::string &, const std::string &);
 
protected:
  void SetFocus() override;
 
  void ReinitOnImage();
 
  virtual void SetTwoWindowView();
 
  void Convert2DImagesTo3D(mitk::DataStorage::SetOfObjects::ConstPointer nodes);
 
  void ReInitializeSettingsNodesAndImageStream();
 
  void UpdateToolStorage();
 
  void CreateOverlays();
 
  void InitImageStream();
 
  QWidget *m_Parent;
  QTimer *m_UpdateTimer;
  QTimer *m_ImageAndNavigationDataLoggingTimer;
  QmitkStdMultiWidget *m_StdMultiWidget;
  itk::SmartPointer<mitk::AbstractUltrasoundTrackerDevice> m_CombinedModality;
  itk::SmartPointer<mitk::DataNode> m_SettingsNode;
  bool m_ReinitAlreadyDone;
  bool m_IsExperimentRunning;
  std::string m_CurrentApplicationName;
  itk::SmartPointer<mitk::USNavigationStepTimer> m_NavigationStepTimer;
 
  QPixmap m_IconRunning;
  QPixmap m_IconNotRunning;
 
  QString m_ResultsDirectory;
  QString m_ExperimentName;
  QString m_ExperimentResultsSubDirectory;
  std::vector<QString>
    m_NavigationStepNames; // stores the names of the navigation steps which are currently used (for logging purposes)
 
  mitk::USNavigationLoggingBackend m_LoggingBackend;
  mitk::USImageLoggingFilter::Pointer m_USImageLoggingFilter;
  mitk::NavigationDataRecorder::Pointer m_NavigationDataRecorder; // records navigation data files
  mitk::NodeDisplacementFilter::Pointer m_TargetNodeDisplacementFilter;
  mitk::NodeDisplacementFilter::Pointer m_AblationZonesDisplacementFilter;
  mitk::NavigationDataObjectVisualizationFilter::Pointer m_ToolVisualizationFilter;
  mitk::DataNode::Pointer m_InstrumentNode;
  std::vector<mitk::DataNode::Pointer> m_AblationZonesVector;
 
  int m_NeedleIndex;
  int m_MarkerIndex;
 
  int m_SceneNumber;
 
  itk::SmartPointer<mitk::TextAnnotation2D> m_WarnOverlay;
 
  //To get tool storage
  mitk::NavigationDataSource::Pointer m_NavigationDataSource;
  mitk::NavigationToolStorage::Pointer m_CurrentStorage;
 
  itk::SmartPointer<mitk::DataNode> m_BaseNode;
  itk::SmartPointer<mitk::DataNode> m_ImageStreamNode;
 
private:
  Ui::QmitkUSNavigationMarkerPlacement *ui;
};
 
#endif