MITK-IGT
IGT Extension of MITK
|
Navigation step for planning the positions for implanting markers. More...
#include <QmitkUSNavigationStepPlacementPlanning.h>
Public Member Functions | |
QmitkUSNavigationStepPlacementPlanning (QWidget *parent=nullptr) | |
~QmitkUSNavigationStepPlacementPlanning () override | |
QString | GetTitle () override |
Getter for the title of the navigation step. This title should be human readable and can be used to display the available steps and the currently active step to the user. The method has to be implemented by a concrete subclass. | |
FilterVector | GetFilter () override |
Getter for navigation data filters of the navigation step. This method may be implemented by a concrete subclass. The default implementation returns an empty vector. | |
![]() | |
QmitkUSAbstractNavigationStep (QWidget *parent=nullptr) | |
~QmitkUSAbstractNavigationStep () override | |
virtual bool | GetIsRestartable () |
Indicates if it makes sense to be able to restart the step. This method must be implemented by concrete subclasses if it should not be possible to restart them. | |
void | SetDataStorage (itk::SmartPointer< mitk::DataStorage > dataStorage) |
Sets the data storage for the exchange of results between navigation steps. | |
void | SetCombinedModality (itk::SmartPointer< mitk::AbstractUltrasoundTrackerDevice > combinedModality) |
Sets the combined modality for the navigation step. OnSetCombinedModality() is called internal. | |
bool | StartStep () |
Should be called to start the navigation step. | |
bool | StopStep () |
Should be called to stop the navigation step. | |
bool | RestartStep () |
Should be called to restart the navigation step. | |
bool | FinishStep () |
Should be called to finish the navigation step. The state has to be 'active' before and is 'started' afterwards. | |
bool | ActivateStep () |
Should be called to activate the navigation step. The step gets started before if it was stopped. | |
bool | DeactivateStep () |
Should be called to deactivate the navigation step. | |
void | Update () |
Should be called periodically while the navigation step is active. Internal, the method OnUpdate() is called. | |
NavigationStepState | GetNavigationStepState () |
Get the current state of the navigation step. | |
Protected Slots | |
void | OnFreeze (bool freezed) |
Freezes or unfreezes the combined modality. In freeze state an interactor is activated in the render window, so the position of the currently active target can be planned by clicking into the render window. | |
void | OnPlaceTargetButtonClicked () |
Plan target position at the intersection between needle path and target surface. | |
void | OnGoToPreviousTarget () |
Selects the previous target as active target. | |
void | OnGoToNextTarget () |
Selects the next target as active target. | |
void | OnRemoveCurrentTargetClicked () |
The currently active target is removed from the data storage. | |
Protected Member Functions | |
bool | OnStartStep () override |
Called when the navigation step gets started. This method has to be implemented by a concrete subclass to handle actions necessary for starting the step (e.g. initializing that has only to be done once). | |
bool | OnStopStep () override |
Callen when the navigation step gets stopped. This method may be implemented by a concrete subclass to handle actions necessary for stopping the step (e.g. cleanup). The default implementation does nothing. | |
bool | OnRestartStep () override |
Called when restarting a navigation step. This method may be implemented by a concrete subclass to handle actions necessary for restarting the navigation step. The default implementations calls OnStopStep() followed by OnStartStep(). | |
bool | OnFinishStep () override |
Called when all necessary actions for the step where done. This method has to be implemented by a concrete subclass to handle actions necessary for finishing the navigation step. | |
bool | OnActivateStep () override |
Called when the navigation step gets activated. This method has to be implemented by a concrete subclass to handle actions necessary on activating the navigation step. | |
bool | OnDeactivateStep () override |
Called when the navigation step gets deactivated (-> state started). This method may be implemented by a concrete subclass to handle actions necessary on deactivating the navigation step, which means switching to another step. | |
void | OnUpdate () override |
Called periodically while a navigation step is active. This method has to be implemented by a concrete subclass to handle all periodic actions during the navigation step. | |
void | OnSettingsChanged (const itk::SmartPointer< mitk::DataNode > settingsNode) override |
Called every time the settings for the navigation process where changed. This method may be implemented by a concrete subclass. The default implementation does nothing. | |
void | OnSetCombinedModality () override |
Called every time SetCombinedModality() was called. This method may be implemented by a concrete subclass to handle this event. The default implementation does nothing. | |
void | CreateTargetNodesIfNecessary () |
void | UpdateTargetCoordinates (mitk::DataNode *) |
void | UpdateTargetColors () |
void | UpdateTargetDescriptions () |
void | GenerateTargetColorLookupTable () |
void | ReinitNodeDisplacementFilter () |
void | CalculatePlanningQuality () |
itk::SmartPointer< mitk::DataNode > | CalculatePlanningQuality (itk::SmartPointer< mitk::Surface > targetSurface, itk::SmartPointer< mitk::PointSet >) |
itk::SmartPointer< mitk::Surface > | CreateSphere (float radius) |
void | UpdateBodyMarkerStatus (mitk::NavigationData::Pointer bodyMarker) |
void | UpdateSensorsNames () |
![]() | |
itk::SmartPointer< mitk::DataStorage > | GetDataStorage (bool throwNull=true) |
Returns the data storage set for the navigation step. | |
itk::SmartPointer< mitk::AbstractUltrasoundTrackerDevice > | GetCombinedModality (bool throwNull=true) |
Returns the combined modality set for the navigation step. | |
itk::SmartPointer< mitk::DataNode > | GetNamedDerivedNode (const char *name, const char *sourceName) |
Returns node with the given name and the given source node (parent) from the data storage. | |
itk::SmartPointer< mitk::DataNode > | GetNamedDerivedNodeAndCreate (const char *name, const char *sourceName) |
Returns node with the given name and the given source node (parent) from the data storage. The node is created if no matching node was found. | |
Additional Inherited Members | |
![]() | |
enum | NavigationStepState { State_Stopped , State_Started , State_Active } |
typedef std::vector< itk::SmartPointer< mitk::NavigationDataToNavigationDataFilter > > | FilterVector |
![]() | |
void | SignalReadyForNextStep () |
Signals that all necessary actions where done. The user can proceed with the next stept after this was signaled. | |
void | SignalNoLongerReadyForNextStep () |
Signals that it is no longer possible to proceed with following steps. This signal is emitted when the result data of the step was removed or changed, so that the old results are invalid for following steps. | |
void | SignalCombinedModalityChanged (itk::SmartPointer< mitk::AbstractUltrasoundTrackerDevice >) |
Signals that the combined modality was changed by this step. This signal is mainly for steps which creates the combined modality. The new combined modality is given as a parameter. | |
void | SignalIntermediateResult (const itk::SmartPointer< mitk::DataNode >) |
Signals that an intermediate result was produced. The properties of the given data node must contain the results. This signal can be used to log the intermediate results of an experiment, for example by using the mitk::USNavigationExperimentLogging. | |
void | SignalSettingsNodeChanged (itk::SmartPointer< mitk::DataNode >) |
Signals that the settings node was changed. This signal must not be emitted in an OnSettingsChanged() method. | |
![]() | |
static const char * | DATANAME_SETTINGS = "Settings" |
static const char * | DATANAME_IMAGESTREAM = "US Image Stream" |
static const char * | DATANAME_BASENODE = QmitkUSAbstractNavigationStep::DATANAME_IMAGESTREAM |
Navigation step for planning the positions for implanting markers.
The planned targets are stored in the data storage under DATANAME_BASENODE -> DATANAME_TARGETS and the needle path to the planned targets are stored under DATANAME_BASENODE -> DATANAME_TARGETS_PATHS. The target structure is expected to be stored under DATANAME_BASENODE -> DATANAME_TUMOR -> DATANAME_TARGETSURFACE.
Definition at line 47 of file QmitkUSNavigationStepPlacementPlanning.h.
|
explicit |
Definition at line 51 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
override |
Definition at line 76 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protected |
Definition at line 654 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protected |
|
protected |
Definition at line 722 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protected |
Definition at line 479 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protected |
Definition at line 616 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
overridevirtual |
Getter for navigation data filters of the navigation step. This method may be implemented by a concrete subclass. The default implementation returns an empty vector.
Reimplemented from QmitkUSAbstractNavigationStep.
Definition at line 338 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
overridevirtual |
Getter for the title of the navigation step. This title should be human readable and can be used to display the available steps and the currently active step to the user. The method has to be implemented by a concrete subclass.
Implements QmitkUSAbstractNavigationStep.
Definition at line 333 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
overrideprotectedvirtual |
Called when the navigation step gets activated. This method has to be implemented by a concrete subclass to handle actions necessary on activating the navigation step.
Implements QmitkUSAbstractNavigationStep.
Definition at line 198 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
overrideprotectedvirtual |
Called when the navigation step gets deactivated (-> state started). This method may be implemented by a concrete subclass to handle actions necessary on deactivating the navigation step, which means switching to another step.
Reimplemented from QmitkUSAbstractNavigationStep.
Definition at line 237 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
overrideprotectedvirtual |
Called when all necessary actions for the step where done. This method has to be implemented by a concrete subclass to handle actions necessary for finishing the navigation step.
Implements QmitkUSAbstractNavigationStep.
Definition at line 159 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protectedslot |
Freezes or unfreezes the combined modality. In freeze state an interactor is activated in the render window, so the position of the currently active target can be planned by clicking into the render window.
Definition at line 363 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protectedslot |
Selects the next target as active target.
Definition at line 438 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protectedslot |
Selects the previous target as active target.
Definition at line 426 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protectedslot |
Plan target position at the intersection between needle path and target surface.
Definition at line 386 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protectedslot |
The currently active target is removed from the data storage.
Definition at line 445 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
overrideprotectedvirtual |
Called when restarting a navigation step. This method may be implemented by a concrete subclass to handle actions necessary for restarting the navigation step. The default implementations calls OnStopStep() followed by OnStartStep().
Reimplemented from QmitkUSAbstractNavigationStep.
Definition at line 151 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
overrideprotectedvirtual |
Called every time SetCombinedModality() was called. This method may be implemented by a concrete subclass to handle this event. The default implementation does nothing.
Reimplemented from QmitkUSAbstractNavigationStep.
Definition at line 346 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
overrideprotectedvirtual |
Called every time the settings for the navigation process where changed. This method may be implemented by a concrete subclass. The default implementation does nothing.
Reimplemented from QmitkUSAbstractNavigationStep.
Definition at line 307 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
overrideprotectedvirtual |
Called when the navigation step gets started. This method has to be implemented by a concrete subclass to handle actions necessary for starting the step (e.g. initializing that has only to be done once).
Implements QmitkUSAbstractNavigationStep.
Definition at line 81 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
overrideprotectedvirtual |
Callen when the navigation step gets stopped. This method may be implemented by a concrete subclass to handle actions necessary for stopping the step (e.g. cleanup). The default implementation does nothing.
Reimplemented from QmitkUSAbstractNavigationStep.
Definition at line 101 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
overrideprotectedvirtual |
Called periodically while a navigation step is active. This method has to be implemented by a concrete subclass to handle all periodic actions during the navigation step.
Implements QmitkUSAbstractNavigationStep.
Definition at line 244 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protected |
Definition at line 631 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protected |
Definition at line 736 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protected |
Definition at line 763 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protected |
Definition at line 554 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protected |
Definition at line 510 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protected |
Definition at line 602 of file QmitkUSNavigationStepPlacementPlanning.cpp.
|
protected |
Definition at line 115 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 114 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 130 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 120 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 136 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 133 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 119 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 113 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 122 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 128 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 127 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 117 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 135 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 132 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 124 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 121 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 126 of file QmitkUSNavigationStepPlacementPlanning.h.
|
protected |
Definition at line 118 of file QmitkUSNavigationStepPlacementPlanning.h.